Assessing contaminated sediments in the context of multiple stressors

Sediments have a major role in ecosystem functioning but can also act as physical or chemical stressors. Anthropogenic activities may change the chemical constituency of sediments and the rate, frequency, and extent of sediment transport, deposition, and resuspension. The importance of sediments as stressors will depend on site ecosystem attributes and the magnitude and preponderance of co-occurring stressors. Contaminants are usually of greater ecological consequence in human-modified, depositional environments, where other anthropogenic stressors often co-occur. Risk assessments and restoration strategies should better consider the role of chemical contamination in the context of multiple stressors. There have been numerous advances in the temporal and spatial characterization of stressor exposures and quantification of biological responses. Contaminated sediments causing biological impairment tend to be patchy, whereas more pervasive anthropogenic stressors, such as alterations to habitat and flow, physical disturbance, and nutrient addition, may drive large-scale ecosystem responses. A systematic assessment of relevant ecosystem attributes and reference conditions can assist in understanding the importance of sediments in the context of other stressors. Experimental manipulations then allow for the controlled study of dominant stressors and the establishment of causal links. This approach will result in more effective management of watersheds and waterways. Environ. Toxicol. Chem. 2010;29:2625–2643. © 2010 SETACPeer Reviewedhttp://deepblue.lib.umich.edu/bitstream/2027.42/78293/1/332_ftp.pd

Pore-size and polymer affect the ability of filters for washing-machines to reduce domestic emissions of fibres to sewage

When clothes are worn and washed, they emit fibres into the ecosystem via discharges of sewage that have been linked to the global dispersion of clothing fibres. Facilities that treat sewage divert some fibres from sewage effluent to sludge, but no current methods of filtration eliminate their environmental release. While filters for washing-machines are sold to consumers with the argument they will reduce the emissions of fibres from clothes to the environment, there is insufficient scientific peer-reviewed evidence assessing their ability to retain fibres from washed clothes and reduce environmental contamination. To improve our understanding and develop more realistic methods to assess the efficiency of filters, we washed replicate cotton and polyester garments in replicate domestic front-loaded washing-machines with and without replicate filters (micro- and milli-meter-sized pores), and then quantified the masses of the fibres retained by the filters and those released in the effluent. Here we show micrometer-sized filters significantly reduced the mass of cotton by 67% (F-2,F-6= 11.69, P<0.01) compared to effluent from appliances with no filters, whilst filters in general reduced polyester fibres in their effluent by more than 65% (micrometer-sized pores) and 74% (millimeter-sized pores) compared to effluent from appliances with no filters (F-2,F-12= 5.20, P<0.05). While filters with micrometer-sized pores caught larger masses and total proportions of fibres than filters with millimeter-sized pores, the differences were only significant for the total proportions of cotton (t = 4.799 df = 4, P<0.01). For tests with garments of either types of polymer, the filtered effluent still contained up to a third of the original masses of fibres released from the garments. Given the diversity of clothes, polymers, appliances and filters currently sold to consumers, our work shows the value of increasing the rigour (e.g. more levels of replication) when testing filters and the need for further studies that test an even greater diversity of materials and methods in order to meet the growing demand for knowledge from governments, industry and the public

Diagnostic odyssey of patients with mitochondrial disease: Results of a survey

Objective To document the complex “diagnostic odyssey” of patients with mitochondrial disease. Methods We analyzed data from 210 Rare Diseases Clinical Research Network Contact Registry participants who were patients with a biochemical deficiency or self-reported diagnosis of mitochondrial disease, or their caregivers. Results Participants saw an average of 8.19 clinicians (SD 8.0, median 5). The first clinician consulted about symptoms was typically a primary care physician (56.7%), although 35.2% of participants initially sought a specialist. Of note, 55.2% of participants received their diagnosis from a neurologist, 18.2% from a clinical geneticist, and 11.8% from a metabolic disease specialist. A majority of the participants (54.6%) received 1 or more nonmitochondrial diagnoses before their final mitochondrial diagnosis. In their pursuit of a diagnosis, 84.8% of participants received blood tests, 71% a muscle biopsy, 60.5% MRI, and 38.6% urine organic acids. In addition, 39.5% of the participants underwent mitochondrial DNA sequencing, 19% sequencing of nuclear gene(s), and 11.4% whole-exome sequencing. Conclusions The diagnostic odyssey of patients with mitochondrial disease is complex and burdensome. It features multiple consultations and tests, and, often, conflicting diagnoses. These reflect disease variety, diagnostic uncertainty, and clinician unfamiliarity. The current survey provides an important benchmark. Its replication at appropriate intervals will assist in tracking changes that may accompany increased popularity of exome testing, more rigorous diagnostic criteria, increased patient reported outcome activity, and trials for promising therapies

Monimuotoisuuden vaikutukset lämpötilaekolokeron ajalliseen vaihteluun lintuyhteisöissä ilmastonmuutoksessa

Climate change alters ecological communities by affecting individual species and interactions between species. However, the impacts of climate change may be buffered by community diversity: diverse communities may be more resistant to climate-driven perturbations than simple communities. Here, we assess how diversity influences long-term thermal niche variation in communities under climate change. We use 50-year continental-scale data on bird communities during breeding and non-breeding seasons to quantify the communities’ thermal variability. Thermal variability is measured as the temporal change in the community’s average thermal niche and it indicates community’s response to climate change. Then, we study how the thermal variability varies as a function of taxonomic, functional, and evolutionary diversity using linear models. We find that communities with low thermal niche variation have higher functional diversity, with this pattern being measurable in the non-breeding but not in the breeding season. Given the expected increase in seasonal variation in the future climate, the differences in bird communities’ thermal variability between breeding and non-breeding seasons may grow wider. Importantly, our results suggest that functionally diverse wildlife communities can mitigate effects of climate change by hindering changes in thermal niche variability, which underscores the importance of addressing the climate and biodiversity crises together.Peer reviewe

Mine waste and acute warming induce energetic stress in the deep-sea sponge Geodia atlantica and coral Primnoa resedeaformis; results from a mesocosm study

There is the potential for climate change to interact with pollution in all of the Earth's oceans. In the fjords of Norway, mine tailings are released into fjords generating suspended sediment plumes that impact deep-sea ecosystems. These same deep-sea ecosystems are expected to undergo periodic warming as climate change increases the frequency of down-welling events in fjords. It remains unknown how a polluted deep-sea ecosystem would respond to down-welling because multiple stressors will often interact in unpredictable ways. Here, we exposed two deep-sea foundation species; the gorgonian coral Primnoa resedaeformis and the demosponge Geodia atlantica to suspended sediment (10 mg L−1) and acute warming (+5°C) in a factorial mesocosm experiment for 40 days. Physiology (respiration, nutrient flux) and cellular responses (lysosomal cell stability) were measured for both the coral and sponge. Exposure to elevated suspended sediment reduced metabolism, supressed silicate uptake and induced cellular instability of the sponge G. atlantica. However, combining sediment with warming caused G. atlantica to respire and excrete nitrogen at a greater rate. For the coral P. resedaeformis, suspended sediments reduced O:N ratios after 40 days, however, warming had a greater effect on P. resedaeformis physiology compared to sediment. Warming increased respiration, nitrogen excretion, and cellular instability which resulted in lower O:N ratios. We argue that suspended sediment and warming can act alone and also interact to cause significant harm to deep-sea biota, however responses are likely to be species-specific. Warming and pollution could interact in the deep-sea to cause mortality to the coral P. resedaeformis and to a lesser extent, the sponge G. atlantica. As foundation species, reducing the abundance of deep sea corals and sponges would likely impact the ecosystems they support.publishedVersio

Exploring narcissism and human- and animal-centered empathy in pet owners

Having empathy for others is typically generalized to having empathy for animals. However, empathy for humans and for animals are only weakly correlated. Thus, some individuals may have low human-centered empathy but have high animal-centered empathy. Here, we explore whether pet owners who are high in narcissism display empathy towards animals despite their low human-centered empathy. We assessed pet owners’ (N = 259) three components of trait narcissism (Agentic Extraversion, Antagonism, and Narcissistic Neuroticism), human- and animal-centered empathy, attitudes towards animals, and their pet attachment. We found that Agentic Extraversion was unrelated to both human- and animal-centered empathy. We also found that Antagonism was related to less empathy for both humans and animals, as well as more negative attitudes towards animals. Lastly, we found that Narcissistic Neuroticism was unrelated to human-centered empathy and positively related to animal-centered empathy and attitudes towards animals. This research furthers our understanding of the relation between empathy towards humans and animals and provides insight into whether animal-assisted approaches may be useful for empathy training in those with narcissistic characteristics

Enhanced Detection of Community-Acquired Pneumonia Pathogens With the BioFire® Pneumonia FilmArray® Panel.

Background: Although most observational studies identify viral or bacterial pathogens in 50% or less of patients hospitalized with community-acquired pneumonia (CAP), we previously demonstrated that a multi-test bundle (MTB) detected a potential pathogen in 73% of patients. This study compares detection rates for potential pathogens with the MTB versus the Biofire® Pneumonia FilmArray® panel (BPFA) multiplex PCR platform and presents an approach for integrating BPFA results as a foundation for subsequent antibiotic stewardship (AS) activities. Methods: Between January 2017 to March 2018, all patients admitted for CAP were enrolled. Patients were considered evaluable if all elements of the MTB and the BPFA were completed, and they met other a priori inclusion criteria. The primary endpoint was the percentage of potential pathogens detected using the MTB (8 viral and 6 bacterial targets) versus the BPFA (8 viral and 18 bacterial targets). Blood and sputum cultures were performed on all patients. Two or more procalcitonin (PCT) levels assisted clinical assessments as to whether detected bacteria were invading or colonizing. Results: Of 585 enrolled patients, 274 were evaluable. A potential viral pathogen was detected in 40.5% with MTB versus 60.9% of patients with BPFA with an odds ratio (95% CI) of 9.00 (4.12 to 23.30) p\u3c0.01. A potential bacterial pathogen was identified in 66.4% with the MTB vs 75.5% with the BPFA odds ratio (95% CI) of 2.09 (1.24 to 3.59), p 0.003). Low PCT levels helped identify detected bacteria as colonizers. Keywords: Community-acquired pneumonia; diagnostics; filmarray; pneumonia; procalcitonin

Eosinophils Are Important for Protection, Immunoregulation and Pathology during Infection with Nematode Microfilariae

Eosinophil responses typify both allergic and parasitic helminth disease. In helminthic disease, the role of eosinophils can be both protective in immune responses and destructive in pathological responses. To investigate whether eosinophils are involved in both protection and pathology during filarial nematode infection, we explored the role of eosinophils and their granule proteins, eosinophil peroxidase (EPO) and major basic protein-1 (MBP-1), during infection with Brugia malayi microfilariae. Using eosinophil-deficient mice (PHIL), we further clarify the role of eosinophils in clearance of microfilariae during primary, but not challenge infection in vivo. Deletion of EPO or MBP-1 alone was insufficient to abrogate parasite clearance suggesting that either these molecules are redundant or eosinophils act indirectly in parasite clearance via augmentation of other protective responses. Absence of eosinophils increased mast cell recruitment, but not other cell types, into the broncho-alveolar lavage fluid during challenge infection. In addition absence of eosinophils or EPO alone, augmented parasite-induced IgE responses, as measured by ELISA, demonstrating that eosinophils are involved in regulation of IgE. Whole body plethysmography indicated that nematode-induced changes in airway physiology were reduced in challenge infection in the absence of eosinophils and also during primary infection in the absence of EPO alone. However lack of eosinophils or MBP-1 actually increased goblet cell mucus production. We did not find any major differences in cytokine responses in the absence of eosinophils, EPO or MBP-1. These results reveal that eosinophils actively participate in regulation of IgE and goblet cell mucus production via granule secretion during nematode-induced pathology and highlight their importance both as effector cells, as damage-inducing cells and as supervisory cells that shape both innate and adaptive immunity

Spatial variation in microbial communities associated with sea-ice algae in Commonwealth Bay, East Antarctica

Antarctic sea-ice forms a complex and dynamic system that drives many ecological processes in the Southern Ocean. Sea-ice microalgae and their associated microbial communities are understood to influence nutrient flow and allocation in marine polar environments. Sea-ice microalgae and their microbiota can have high seasonal and regional (>1000 km2) compositional and abundance variation, driven by factors modulating their growth, symbiotic interactions and function. In contrast, our knowledge of small-scale variation in these communities is limited. Understanding variation across multiple scales and its potential drivers is critical for informing on how multiple stressors impact sea-ice communities and the functions they provide. Here, we characterized bacterial communities associated with sea-ice microalgae and the potential drivers that influence their variation across a range of spatial scales (metres to >10 kms) in a previously understudied area in Commonwealth Bay, East Antarctica where anomalous events have substantially and rapidly expanded local sea-ice coverage. We found a higher abundance and different composition of bacterial communities living in sea-ice microalgae closer to the shore compared to those further from the coast. Variation in community structure increased linearly with distance between samples. Ice thickness and depth to the seabed were found to be poor predictors of these communities. Further research on the small-scale environmental drivers influencing these communities is needed to fully understand how large-scale regional events can affect local function and ecosystem processes

Disaster Risks Research and Assessment to Promote Risk Reduction and Management

Natural hazard events lead to disasters when the events interact with exposed and vulnerable physical and social systems. Despite significant progress in scientific understanding of physical phenomena leading to natural hazards as well as of vulnerability and exposure, disaster losses due to natural events do not show a tendency to decrease. This tendency is associated with many factors including increase in populations and assets at risk as well as in frequency and/or magnitude of natural events, especially those related to hydro-meteorological and climatic hazards. But essentially disaster losses increase because some of the elements of the multidimensional dynamic disaster risk system are not accounted for risk assessments. A comprehensive integrated system analysis and periodic assessment of disaster risks at any scale, from local to global, based on knowledge and data/information accumulated so far, are essential scientific tools that can assist in recognition and reduction of disaster risks. This paper reviews and synthesizes the knowledge of natural hazards, vulnerabilities, and disaster risks and aims to highlight potential contributions of science to disaster risk reduction (DRR) in order to provide policy-makers with the knowledge necessary to assist disaster risk mitigation and disaster risk management (DRM)